Modify

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Possibilities offered by the sub-menu Modify shown on the left; some of these can be accessed directly using icons in the main toolbar.




Model

Offer many possibilities to modify the model.

Bond distance

Change the default bond distances.

Enantiomorph

Switch to the other enantiomorph.

Transform model

Apply symmetry transformations to the model.

Cell Content

Modify the unit cell content.


Model


Tools are supplied in order to modify the model. It is possible to access them directly using the toolbar:



Enclose in a poligon the atoms to be deleted.

Click on atoms to be deleted.

Click on atoms to change their label.

Click on atoms to change their species.

Click on atoms to change their sequence number.

Sort atoms with respect to the atomic species.

Click on couples of atoms to be bonded.

Click on couples of atoms to delete their bond.

Re-compute connectivity.

Move a group of atoms in a symmetrically equivalent position.

Complete 6-membered ring.

Regularize 6-membered ring.

Add atoms to complete a Tetrahedron.

Add one atom to the model.

Manage atom site (reduced occupancy, disorder, ...).


Bond Distance


This window is devoted to the modification of the bond distances between couples of atomic species:



Enantiomorph


Makes it possible to switch between one enantiomorph and the other.


Transform Model


Make it possible to modify the asymmetric coordinates of the model applying a rotation and a translation operator.



Cell Content


During the refinement the unit cell content declared can change (solvent molecules etc.) By means of this window the user can add/delete atomic species and modify the number of atoms in the unit cell.



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